6SG2 image
Entry Detail
PDB ID:
6SG2
Keywords:
Title:
FeFe Hydrogenase from Desulfovibrio desulfuricans in Hinact state
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2019-08-02
Release Date:
2020-07-08
Method Details:
Experimental Method:
Resolution:
1.65 Å
R-Value Free:
0.21
R-Value Work:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Periplasmic [Fe] hydrogenase large subunit
Chain IDs:A (auth: AAA)
Chain Length:396
Number of Molecules:1
Biological Source:Desulfovibrio desulfuricans
Polymer Type:polypeptide(L)
Description:HydB
Chain IDs:B (auth: BBB)
Chain Length:88
Number of Molecules:1
Biological Source:Desulfovibrio desulfuricans
Primary Citation
Caught in the H inact : Crystal Structure and Spectroscopy Reveal a Sulfur Bound to the Active Site of an O 2 -stable State of [FeFe] Hydrogenase.
Angew.Chem.Int.Ed.Engl. 59 16786 16794 (2020)
PMID: 32488975 DOI: 10.1002/anie.202005208

Abstact

[FeFe] hydrogenases are the most active H2 converting catalysts in nature, but their extreme oxygen sensitivity limits their use in technological applications. The [FeFe] hydrogenases from sulfate reducing bacteria can be purified in an O2 -stable state called Hinact . To date, the structure and mechanism of formation of Hinact remain unknown. Our 1.65 Å crystal structure of this state reveals a sulfur ligand bound to the open coordination site. Furthermore, in-depth spectroscopic characterization by X-ray absorption spectroscopy (XAS), nuclear resonance vibrational spectroscopy (NRVS), resonance Raman (RR) spectroscopy and infrared (IR) spectroscopy, together with hybrid quantum mechanical and molecular mechanical (QM/MM) calculations, provide detailed chemical insight into the Hinact state and its mechanism of formation. This may facilitate the design of O2 -stable hydrogenases and molecular catalysts.

Legend

Protein

Chemical

Disease

Primary Citation of related structures