6SFB image
Deposition Date 2019-08-01
Release Date 2019-09-25
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6SFB
Keywords:
Title:
EED in complex with a triazolopyrimidine
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.52 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Polycomb protein EED
Gene (Uniprot):EED
Chain IDs:A, B
Chain Length:366
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Rapid Identification of Novel Allosteric PRC2 Inhibitors.
Acs Chem.Biol. 14 2134 2140 (2019)
PMID: 31525019 DOI: 10.1021/acschembio.9b00468

Abstact

Enhancer of zeste homologue 2 (EZH2), the catalytic subunit of polycomb repressive complex 2 (PRC2), regulates chromatin state and gene expression by methylating histone H3 lysine 27. EZH2 is overexpressed or mutated in various hematological malignancies and solid cancers. Our previous efforts to identify inhibitors of PRC2 methyltransferase activity by high-throughput screening (HTS) resulted in large numbers of false positives and thus a significant hit deconvolution challenge. More recently, others have reported compounds that bind to another PRC2 core subunit, EED, and allosterically inhibit EZH2 activity. This mechanism is particularly appealing as it appears to retain potency in cell lines that have acquired resistance to orthosteric EZH2 inhibition. By designing a fluorescence polarization probe based on the reported EED binding compounds, we were able to quickly and cleanly re-triage our previously challenging HTS hit list and identify novel allosteric PRC2 inhibitors.

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Primary Citation of related structures