6SBQ image
Deposition Date 2019-07-22
Release Date 2020-03-25
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6SBQ
Keywords:
Title:
The crystal structure of PfA-M1 in complex with 7-amino-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.33 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:M1-family alanyl aminopeptidase
Chain IDs:A
Chain Length:924
Number of Molecules:1
Biological Source:Plasmodium falciparum (isolate 3D7)
Primary Citation
Aminobenzosuberone derivatives as PfA-M1 inhibitors: Molecular recognition and antiplasmodial evaluation.
Bioorg.Chem. 98 103750 103750 (2020)
PMID: 32182520 DOI: 10.1016/j.bioorg.2020.103750

Abstact

Aminobenzosuberone-based PfA-M1 inhibitors were explored as novel antimalarial agents against two different Plasmodium falciparum strains. The 4-phenyl derivative 7c exhibited the most encouraging growth inhibitory activity with IC50 values of 6.5-11.2 µM. X-ray crystal structures and early assessment of DMPK/ADME-Tox parameters allowed us to initiate structure-based drug design approach and understand the liabilities (such as potential metabolic and aqueous solubility issues) as well as identify the opportunities for improvement of this aminobenzosuberone series. It also suggested that compound 7c should be regarded as an attractive chemical tool to investigate the different biological roles of this multifunctional PfA-M1 protein.

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Primary Citation of related structures