6SAK image
Deposition Date 2019-07-17
Release Date 2019-10-02
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6SAK
Keywords:
Title:
Structure of the OTULINcat C129A - SNX27 PDZ domain complex.
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ubiquitin thioesterase otulin
Gene (Uniprot):OTULIN
Mutations:C129A
Chain IDs:A, B
Chain Length:275
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Sorting nexin-27
Gene (Uniprot):SNX27
Chain IDs:C, D
Chain Length:96
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Regulation of the endosomal SNX27-retromer by OTULIN.
Nat Commun 10 4320 4320 (2019)
PMID: 31541095 DOI: 10.1038/s41467-019-12309-z

Abstact

OTULIN (OTU Deubiquitinase With Linear Linkage Specificity) specifically hydrolyzes methionine1 (Met1)-linked ubiquitin chains conjugated by LUBAC (linear ubiquitin chain assembly complex). Here we report on the mass spectrometric identification of the OTULIN interactor SNX27 (sorting nexin 27), an adaptor of the endosomal retromer complex responsible for protein recycling to the cell surface. The C-terminal PDZ-binding motif (PDZbm) in OTULIN associates with the cargo-binding site in the PDZ domain of SNX27. By solving the structure of the OTU domain in complex with the PDZ domain, we demonstrate that a second interface contributes to the selective, high affinity interaction of OTULIN and SNX27. SNX27 does not affect OTULIN catalytic activity, OTULIN-LUBAC binding or Met1-linked ubiquitin chain homeostasis. However, via association, OTULIN antagonizes SNX27-dependent cargo loading, binding of SNX27 to the VPS26A-retromer subunit and endosome-to-plasma membrane trafficking. Thus, we define an additional, non-catalytic function of OTULIN in the regulation of SNX27-retromer assembly and recycling to the cell surface.

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