6S8Z image
Deposition Date 2019-07-11
Release Date 2020-02-26
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6S8Z
Keywords:
Title:
Elongation Factor P from Corynebacterium glutamicum
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.26
R-Value Work:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Elongation factor P
Chain IDs:A
Chain Length:187
Number of Molecules:1
Biological Source:Corynebacterium glutamicum
Primary Citation
Structure and Function of an Elongation Factor P Subfamily in Actinobacteria.
Cell Rep 30 4332 4342.e5 (2020)
PMID: 32234471 DOI: 10.1016/j.celrep.2020.03.009

Abstact

Translation of consecutive proline motifs causes ribosome stalling and requires rescue via the action of a specific translation elongation factor, EF-P in bacteria and archaeal/eukaryotic a/eIF5A. In Eukarya, Archaea, and all bacteria investigated so far, the functionality of this translation elongation factor depends on specific and rather unusual post-translational modifications. The phylum Actinobacteria, which includes the genera Corynebacterium, Mycobacterium, and Streptomyces, is of both medical and economic significance. Here, we report that EF-P is required in these bacteria in particular for the translation of proteins involved in amino acid and secondary metabolite production. Notably, EF-P of Actinobacteria species does not need any post-translational modification for activation. While the function and overall 3D structure of this EF-P type is conserved, the loop containing the conserved lysine is flanked by two essential prolines that rigidify it. Actinobacteria's EF-P represents a unique subfamily that works without any modification.

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Primary Citation of related structures