6S8J image
Entry Detail
PDB ID:
6S8J
EMDB ID:
Keywords:
Title:
Structure of ZEBOV GP in complex with 5T0180 antibody
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-07-10
Release Date:
2020-02-12
Method Details:
Experimental Method:
Resolution:
2.91 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Envelope Glycoprotein 1
Chain IDs:C (auth: A), I (auth: C), J (auth: E)
Chain Length:323
Number of Molecules:3
Biological Source:Ebola virus
Polymer Type:polypeptide(L)
Description:Envelope glycoprotein
Chain IDs:D (auth: B), G (auth: D), H (auth: F)
Chain Length:168
Number of Molecules:3
Biological Source:Ebola virus
Polymer Type:polypeptide(L)
Description:Heavy Chain
Chain IDs:B (auth: H), K (auth: P), L (auth: Y)
Chain Length:231
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Light Chain
Chain IDs:A (auth: L), E (auth: O), F (auth: U)
Chain Length:218
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Structural Basis for a Convergent Immune Response against Ebola Virus.
Cell Host Microbe 27 418 427.e4 (2020)
PMID: 32059794 DOI: 10.1016/j.chom.2020.01.007

Abstact

Ebola virus disease is a severe health problem in Africa. Vaccines that display the Zaire ebolavirus glycoprotein spike complex are a prime component for the effort to combat it. The VH3-15/Vλ1-40-based class of antibodies was recently discovered to be a common response in individuals who received the Ebola virus vaccines. These antibodies display attractive properties, and thus likely contribute to the efficacy of the vaccines. Here, we use cryo-EM to elucidate how three VH3-15/Vλ1-40 antibodies from different individuals target the virus and found a convergent mechanism against a partially conserved site on the spike complex. Our study rationalizes the selection of the VH3-15/Vλ1-40 germline genes for specifically targeting this site and highlights Ebolavirus species-specific sequence divergences that may restrict breadth of VH3-15/Vλ1-40-based humoral response. The results from this study could help develop improved immunization schemes and further enable the design of immunogens that would be efficacious against a broader set of Ebolavirus species.

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Primary Citation of related structures