ISDA

Deposition Date 2019-07-02

Release Date 2019-08-21

Last Version Date 2024-01-24

Entry Detail

PDB ID:

6S5R

Keywords:

SUGAR BINDING PROTEIN

Title:

Cfucosylated second generation peptide dendrimer SBD6 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 2.08 Angstrom resolution, incomplete structure

Biological Source:

Source Organism:

Pseudomonas aeruginosa (Taxon ID: 287)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli 'BL21-Gold(DE3)pLysS AG'

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.08 Å

R-Value Free:

0.23

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 61 2 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Fucose-binding lectin
Chain IDs:A, B, C, D
Chain Length:115
Number of Molecules:4
Biological Source:Pseudomonas aeruginosa

UniProt ID:Q9HYN5 Pfam ID:PF07472

Polymer Type:polypeptide(D)
Molecule:SBD6
Chain IDs:E (auth: F), F (auth: H)
Chain Length:3
Number of Molecules:2
Biological Source:synthetic construct

Ligand Molecules

ZDC

Primary Citation

X-Ray Crystal Structure of a Second Generation Peptide Dendrimer in Complex with Pseudomonas aeruginosa Lectin LecB

Baeriswyl, S, Javor, S, Stocker, A, Darbre, T, Reymond, J.-L.Show

Helv.Chim.Acta ? ? ? (2019)

DOI: 10.1002/hlca.201900178

Primary Citation of related structures