6S4C image
Deposition Date 2019-06-27
Release Date 2020-02-19
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6S4C
Title:
Crystal Structure of the vWFA2 subdomain of type VII collagen
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Collagen alpha-1(VII) chain
Gene (Uniprot):Col7a1
Chain IDs:A
Chain Length:196
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Structural and biophysical characterization of the type VII collagen vWFA2 subdomain leads to identification of two binding sites.
Febs Open Bio 10 580 592 (2020)
PMID: 32031736 DOI: 10.1002/2211-5463.12807

Abstact

Type VII collagen is an extracellular matrix protein, which is important for skin stability; however, detailed information at the molecular level is scarce. The second vWFA (von Willebrand factor type A) domain of type VII collagen mediates important interactions, and immunization of mice induces skin blistering in certain strains. To understand vWFA2 function and the pathophysiological mechanisms leading to skin blistering, we structurally characterized this domain by X-ray crystallography and NMR spectroscopy. Cell adhesion assays identified two new interactions: one with β1 integrin via its RGD motif and one with laminin-332. The latter interaction was confirmed by surface plasmon resonance with a KD of about 1 mm. These data show that vWFA2 has additional functions in the extracellular matrix besides interacting with type I collagen.

Legend

Protein

Chemical

Disease

Primary Citation of related structures