6S2C image
Deposition Date 2019-06-20
Release Date 2020-04-29
Last Version Date 2024-05-22
Entry Detail
PDB ID:
6S2C
Keywords:
Title:
Acquired functional capsid structures in metazoan totivirus-like dsRNA virus.
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Capsid protein
Chain IDs:A
Chain Length:840
Number of Molecules:1
Biological Source:Omono River virus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Capsid protein
Chain IDs:B
Chain Length:842
Number of Molecules:1
Biological Source:Omono River virus
Ligand Molecules
Primary Citation
Acquired Functional Capsid Structures in Metazoan Totivirus-like dsRNA Virus.
Structure 28 888 896.e3 (2020)
PMID: 32413288 DOI: 10.1016/j.str.2020.04.016

Abstact

Non-enveloped icosahedral double-stranded RNA (dsRNA) viruses possess multifunctional capsids required for their proliferation. Whereas protozoan/fungal dsRNA viruses have a relatively simple capsid structure, which suffices for the intracellular phase in their life cycle, metazoan dsRNA viruses have acquired additional structural features as an adaptation for extracellular cell-to-cell transmission in multicellular hosts. Here, we present the first atomic model of a metazoan dsRNA totivirus-like virus and the structure reveals three unique structural traits: a C-terminal interlocking arm, surface projecting loops, and an obstruction at the pore on the 5-fold symmetry axis. These traits are keys to understanding the capsid functions of metazoan dsRNA viruses, such as particle stability and formation, cell entry, and endogenous intraparticle transcription of mRNA. On the basis of molecular dynamics simulations of the obstructed pore, we propose a possible mechanism of intraparticle transcription in totivirus-like viruses, which dynamically switches between open and closed states of the pore(s).

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Primary Citation of related structures