6S1I image
Deposition Date 2019-06-18
Release Date 2019-06-26
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6S1I
Keywords:
Title:
Crystal Structure of DYRK1A with small molecule inhibitor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.38 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Gene (Uniprot):DYRK1A
Chain IDs:A, B, C, D
Chain Length:361
Number of Molecules:4
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PTR A TYR modified residue
Primary Citation
Mining Public Domain Data to Develop Selective DYRK1A Inhibitors.
Acs Med.Chem.Lett. 11 1620 1626 (2020)
PMID: 32832032 DOI: 10.1021/acsmedchemlett.0c00279

Abstact

Kinases represent one of the most intensively pursued groups of targets in modern-day drug discovery. Often it is desirable to achieve selective inhibition of the kinase of interest over the remaining ∼500 kinases in the human kinome. This is especially true when inhibitors are intended to be used to study the biology of the target of interest. We present a pipeline of open-source software that analyzes public domain data to repurpose compounds that have been used in previous kinase inhibitor development projects. We define the dual-specificity tyrosine-regulated kinase 1A (DYRK1A) as the kinase of interest, and by addition of a single methyl group to the chosen starting point we remove glycogen synthase kinase β (GSK3β) and cyclin-dependent kinase (CDK) inhibition. Thus, in an efficient manner we repurpose a GSK3β/CDK chemotype to deliver 8b, a highly selective DYRK1A inhibitor.

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