6S0Y image
Entry Detail
PDB ID:
6S0Y
Title:
Nanobody targeting influenza A matrix protein 2 ectodomain (M2e)
Biological Source:
PDB Version:
Deposition Date:
2019-06-18
Release Date:
2020-01-22
Method Details:
Experimental Method:
Resolution:
1.81 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:M2e-VHH-23m
Chain IDs:A, B
Chain Length:123
Number of Molecules:2
Biological Source:Lama glama
Polymer Type:polypeptide(L)
Description:Matrix protein 2
Chain IDs:C, D
Chain Length:23
Number of Molecules:2
Biological Source:Influenza A virus (A/Jeju/2279/2007(H1N1))
Primary Citation
Selective Engagement of Fc gamma RIV by a M2e-Specific Single Domain Antibody Construct Protects Against Influenza A Virus Infection.
Front Immunol 10 2920 2920 (2019)
PMID: 31921179 DOI: 10.3389/fimmu.2019.02920

Abstact

Lower respiratory tract infections, such as infections caused by influenza A viruses, are a constant threat for public health. Antivirals are indispensable to control disease caused by epidemic as well as pandemic influenza A. We developed a novel anti-influenza A virus approach based on an engineered single-domain antibody (VHH) construct that can selectively recruit innate immune cells to the sites of virus replication. This protective construct comprises two VHHs. One VHH binds with nanomolar affinity to the conserved influenza A matrix protein 2 (M2) ectodomain (M2e). Co-crystal structure analysis revealed that the complementarity determining regions 2 and 3 of this VHH embrace M2e. The second selected VHH specifically binds to the mouse Fcγ Receptor IV (FcγRIV) and was genetically fused to the M2e-specific VHH, which resulted in a bi-specific VHH-based construct that could be efficiently expressed in Pichia pastoris. In the presence of M2 expressing or influenza A virus-infected target cells, this single domain antibody construct selectively activated the mouse FcγRIV. Moreover, intranasal delivery of this bispecific FcγRIV-engaging VHH construct protected wild type but not FcγRIV-/- mice against challenge with an H3N2 influenza virus. These results provide proof of concept that VHHs directed against a surface exposed viral antigen can be readily armed with effector functions that trigger protective antiviral activity beyond direct virus neutralization.

Legend

Protein

Chemical

Disease

Primary Citation of related structures