6RVR image
Deposition Date 2019-05-31
Release Date 2019-09-18
Last Version Date 2024-05-22
Entry Detail
PDB ID:
6RVR
Keywords:
Title:
Atomic structure of the Epstein-Barr portal, structure I
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.46 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Portal protein
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:613
Number of Molecules:12
Biological Source:Epstein-Barr virus (strain GD1)
Ligand Molecules
Primary Citation
Atomic structure of the Epstein-Barr virus portal.
Nat Commun 10 3891 3891 (2019)
PMID: 31467275 DOI: 10.1038/s41467-019-11706-8

Abstact

Herpesviridae is a vast family of enveloped DNA viruses that includes eight distinct human pathogens, responsible for diseases that range from almost asymptomatic to severe and life-threatening. Epstein-Barr virus infects B-cells and epithelial cells, causing infectious mononucleosis, as well as a number of cancers. Epstein-Barr infection cannot be cured since neither vaccine nor antiviral drug treatments are available. All herpesviruses contain a linear double-stranded DNA genome, enclosed within an icosahedral capsid. Viral portal protein plays a key role in the procapsid assembly and DNA packaging. The portal is the entrance and exit pore for the viral genome, making it an attractive pharmacological target for the development of new antivirals. Here we present the atomic structure of the portal protein of Epstein-Barr virus, solved by cryo-electron microscopy at 3.5 Å resolution. The detailed architecture of this protein suggests that it plays a functional role in DNA retention during packaging.

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Primary Citation of related structures