6RV7 image
Entry Detail
PDB ID:
6RV7
Keywords:
Title:
Crystal Structure of Glucuronoyl Esterase from Cerrena unicolor inactive S270A variant in complex with the aldouronic acid UXXR
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-05-31
Release Date:
2020-03-18
Method Details:
Experimental Method:
Resolution:
1.73 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:4-O-methyl-glucuronoyl methylesterase
Mutations:S270A
Chain IDs:A, B
Chain Length:401
Number of Molecules:2
Biological Source:Cerrena unicolor
Peptide-like Molecules
PRD_900116
Primary Citation
The structural basis of fungal glucuronoyl esterase activity on natural substrates.
Nat Commun 11 1026 1026 (2020)
PMID: 32094331 DOI: 10.1038/s41467-020-14833-9

Abstact

Structural and functional studies were conducted of the glucuronoyl esterase (GE) from Cerrena unicolor (CuGE), an enzyme catalyzing cleavage of lignin-carbohydrate ester bonds. CuGE is an α/β-hydrolase belonging to carbohydrate esterase family 15 (CE15). The enzyme is modular, comprised of a catalytic and a carbohydrate-binding domain. SAXS data show CuGE as an elongated rigid molecule where the two domains are connected by a rigid linker. Detailed structural information of the catalytic domain in its apo- and inactivated form and complexes with aldouronic acids reveal well-defined binding of the 4-O-methyl-a-D-glucuronoyl moiety, not influenced by the nature of the attached xylo-oligosaccharide. Structural and sequence comparisons within CE15 enzymes reveal two distinct structural subgroups. CuGE belongs to the group of fungal CE15-B enzymes with an open and flat substrate-binding site. The interactions between CuGE and its natural substrates are explained and rationalized by the structural results, microscale thermophoresis and isothermal calorimetry.

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