ISDA

Deposition Date 2019-05-22

Release Date 2020-01-01

Last Version Date 2024-05-15

Entry Detail

PDB ID:

6RST

Keywords:

IMMUNE SYSTEM

Title:

TBK1 in complex with inhibitor compound 24

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.29 Å

R-Value Free:

0.30

R-Value Work:

0.24

R-Value Observed:

0.24

Space Group:

P 32 2 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Serine/threonine-protein kinase TBK1
Gene (Uniprot):TBK1
Mutations:S172E
Chain IDs:A
Chain Length:663
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9UHD2 Pfam ID:PF00069, PF18396, PF18394

Ligand Molecules

KHQ

Primary Citation

Discovery of BAY-985, a Highly Selective TBK1/IKK epsilon Inhibitor.

Lefranc, J, Schulze, V.K, Hillig, R.C, Briem, H, Prinz, F, Mengel, A, Heinrich, T, Balint, J, Rengachari, S, Irlbacher, H, Stockigt, D, Bomer, U, Bader, B, Gradl, S.N, Nising, C.F, von Nussbaum, F, Mumberg, D, Panne, D, Wengner, A.M.Show

J.Med.Chem. 63 601 612 (2020)

PMID: 31859507 DOI: 10.1021/acs.jmedchem.9b01460

Abstact

The serine/threonine kinase TBK1 (TANK-binding kinase 1) and its homologue IKKε are noncanonical members of the inhibitor of the nuclear factor κB (IκB) kinase family. These kinases play important roles in multiple cellular pathways and, in particular, in inflammation. Herein, we describe our investigations on a family of benzimidazoles and the identification of the potent and highly selective TBK1/IKKε inhibitor BAY-985. BAY-985 inhibits the cellular phosphorylation of interferon regulatory factor 3 and displays antiproliferative efficacy in the melanoma cell line SK-MEL-2 but showed only weak antitumor activity in the SK-MEL-2 human melanoma xenograft model.

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Primary Citation of related structures