6RMT image
Deposition Date 2019-05-07
Release Date 2020-11-18
Last Version Date 2024-10-16
Entry Detail
PDB ID:
6RMT
Keywords:
Title:
Crystal structure of disulphide-linked human C3d dimer
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.19
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Complement C3
Gene (Uniprot):C3
Chain IDs:A, B
Chain Length:310
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Insights Into the Structure-Function Relationships of Dimeric C3d Fragments.
Front Immunol 12 714055 714055 (2021)
PMID: 34434196 DOI: 10.3389/fimmu.2021.714055

Abstact

Cleavage of C3 to C3a and C3b plays a central role in the generation of complement-mediated defences. Although the thioester-mediated surface deposition of C3b has been well-studied, fluid phase dimers of C3 fragments remain largely unexplored. Here we show C3 cleavage results in the spontaneous formation of C3b dimers and present the first X-ray crystal structure of a disulphide-linked human C3d dimer. Binding studies reveal these dimers are capable of crosslinking complement receptor 2 and preliminary cell-based analyses suggest they could modulate B cell activation to influence tolerogenic pathways. Altogether, insights into the physiologically-relevant functions of C3d(g) dimers gained from our findings will pave the way to enhancing our understanding surrounding the importance of complement in the fluid phase and could inform the design of novel therapies for immune system disorders in the future.

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Primary Citation of related structures