6RIA image
Deposition Date 2019-04-23
Release Date 2019-07-17
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6RIA
Keywords:
Title:
Bactofilin from Thermus thermophilus, F105R mutant crystal structure
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.30
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
I 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:bactofilin
Gene (Uniprot):TTHA1769
Mutagens:F105R
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA (auth: 1), BA (auth: 2), CA (auth: 3), DA (auth: 4), EA (auth: 5), FA (auth: 6)
Chain Length:123
Number of Molecules:32
Biological Source:Thermus thermophilus
Ligand Molecules
Primary Citation
The structure of bactofilin filaments reveals their mode of membrane binding and lack of polarity.
Nat Microbiol 4 2357 2368 (2019)
PMID: 31501539 DOI: 10.1038/s41564-019-0544-0

Abstact

Bactofilins are small β-helical proteins that form cytoskeletal filaments in a range of bacteria. Bactofilins have diverse functions, from cell stalk formation in Caulobacter crescentus to chromosome segregation and motility in Myxococcus xanthus. However, the precise molecular architecture of bactofilin filaments has remained unclear. Here, sequence analysis and electron microscopy results reveal that, in addition to being widely distributed across bacteria and archaea, bactofilins are also present in a few eukaryotic lineages such as the Oomycetes. Electron cryomicroscopy analysis demonstrated that the sole bactofilin from Thermus thermophilus (TtBac) forms constitutive filaments that polymerize through end-to-end association of the β-helical domains. Using a nanobody, we determined the near-atomic filament structure, showing that the filaments are non-polar. A polymerization-impairing mutation enabled crystallization and structure determination, while reaffirming the lack of polarity and the strength of the β-stacking interface. To confirm the generality of the lack of polarity, we performed coevolutionary analysis on a large set of sequences. Finally, we determined that the widely conserved N-terminal disordered tail of TtBac is responsible for direct binding to lipid membranes, both on liposomes and in Escherichia coli cells. Membrane binding is probably a common feature of these widespread but only recently discovered filaments of the prokaryotic cytoskeleton.

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Primary Citation of related structures