6R2S image
Entry Detail
PDB ID:
6R2S
Keywords:
Title:
The structure of Plasmodium vivax Duffy binding protein (PvDBP) bound to human antibody DB9
Biological Source:
PDB Version:
Deposition Date:
2019-03-18
Release Date:
2019-03-27
Method Details:
Experimental Method:
Resolution:
3.04 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 62 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Antibody DB9 light chain
Chain IDs:A
Chain Length:233
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Antibody DB9 heavy chain
Chain IDs:B
Chain Length:278
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Duffy receptor
Chain IDs:C
Chain Length:300
Number of Molecules:1
Biological Source:Plasmodium vivax (strain Salvador I)
Ligand Molecules
Primary Citation
Structural basis for inhibition of Plasmodium vivax invasion by a broadly neutralizing vaccine-induced human antibody.
Nat Microbiol 4 1497 1507 (2019)
PMID: 31133755 DOI: 10.1038/s41564-019-0462-1

Abstact

The most widespread form of malaria is caused by Plasmodium vivax. To replicate, this parasite must invade immature red blood cells through a process requiring interaction of the P. vivax Duffy binding protein (PvDBP) with its human receptor, the Duffy antigen receptor for chemokines. Naturally acquired antibodies that inhibit this interaction associate with clinical immunity, suggesting PvDBP as a leading candidate for inclusion in a vaccine to prevent malaria due to P. vivax. Here, we isolated a panel of monoclonal antibodies from human volunteers immunized in a clinical vaccine trial of PvDBP. We screened their ability to prevent PvDBP from binding to the Duffy antigen receptor for chemokines, and their capacity to block red blood cell invasion by a transgenic Plasmodium knowlesi parasite genetically modified to express PvDBP and to prevent reticulocyte invasion by multiple clinical isolates of P. vivax. This identified a broadly neutralizing human monoclonal antibody that inhibited invasion of all tested strains of P. vivax. Finally, we determined the structure of a complex of this antibody bound to PvDBP, indicating the molecular basis for inhibition. These findings will guide future vaccine design strategies and open up possibilities for testing the prophylactic use of such an antibody.

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