6R1M image
Entry Detail
PDB ID:
6R1M
Keywords:
Title:
Crystal structure of E. coli seryl-tRNA synthetase complexed to seryl sulfamoyl adenosine
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-03-14
Release Date:
2020-01-22
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Serine--tRNA ligase
Chain IDs:A, B
Chain Length:437
Number of Molecules:2
Biological Source:Escherichia coli
Primary Citation
Structure-Guided Enhancement of Selectivity of Chemical Probe Inhibitors Targeting Bacterial Seryl-tRNA Synthetase.
J.Med.Chem. 62 9703 9717 (2019)
PMID: 31626547 DOI: 10.1021/acs.jmedchem.9b01131

Abstact

Aminoacyl-tRNA synthetases are ubiquitous and essential enzymes for protein synthesis and also a variety of other metabolic processes, especially in bacterial species. Bacterial aminoacyl-tRNA synthetases represent attractive and validated targets for antimicrobial drug discovery if issues of prokaryotic versus eukaryotic selectivity and antibiotic resistance generation can be addressed. We have determined high-resolution X-ray crystal structures of the Escherichia coli and Staphylococcus aureus seryl-tRNA synthetases in complex with aminoacyl adenylate analogues and applied a structure-based drug discovery approach to explore and identify a series of small molecule inhibitors that selectively inhibit bacterial seryl-tRNA synthetases with greater than 2 orders of magnitude compared to their human homologue, demonstrating a route to the selective chemical inhibition of these bacterial targets.

Legend

Protein

Chemical

Disease

Primary Citation of related structures