6QVJ image
Deposition Date 2019-03-02
Release Date 2019-11-27
Last Version Date 2024-05-15
Entry Detail
PDB ID:
6QVJ
Title:
HsCKK (human CAMSAP1) decorated 14pf taxol-GDP microtubule
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.80 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Calmodulin-regulated spectrin-associated protein 1
Gene (Uniprot):CAMSAP1
Chain IDs:A (auth: I)
Chain Length:174
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Tubulin alpha-1B chain
Gene (Uniprot):TUBA1B
Chain IDs:B (auth: O), C (auth: X)
Chain Length:451
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Tubulin beta chain
Gene (Uniprot):TUBB
Chain IDs:D (auth: S), E (auth: U)
Chain Length:444
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structural determinants of microtubule minus end preference in CAMSAP CKK domains.
Nat Commun 10 5236 5236 (2019)
PMID: 31748546 DOI: 10.1038/s41467-019-13247-6

Abstact

CAMSAP/Patronins regulate microtubule minus-end dynamics. Their end specificity is mediated by their CKK domains, which we proposed recognise specific tubulin conformations found at minus ends. To critically test this idea, we compared the human CAMSAP1 CKK domain (HsCKK) with a CKK domain from Naegleria gruberi (NgCKK), which lacks minus-end specificity. Here we report near-atomic cryo-electron microscopy structures of HsCKK- and NgCKK-microtubule complexes, which show that these CKK domains share the same protein fold, bind at the intradimer interprotofilament tubulin junction, but exhibit different footprints on microtubules. NMR experiments show that both HsCKK and NgCKK are remarkably rigid. However, whereas NgCKK binding does not alter the microtubule architecture, HsCKK remodels its microtubule interaction site and changes the underlying polymer structure because the tubulin lattice conformation is not optimal for its binding. Thus, in contrast to many MAPs, the HsCKK domain can differentiate subtly specific tubulin conformations to enable microtubule minus-end recognition.

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Primary Citation of related structures