6QV9 image
Entry Detail
PDB ID:
6QV9
Keywords:
Title:
Staphylococcus aureus superoxide dismutase SodA double mutant
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-03-01
Release Date:
2020-03-25
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Superoxide dismutase
Chain IDs:A, B
Chain Length:199
Number of Molecules:2
Biological Source:Staphylococcus aureus
Ligand Molecules
Primary Citation
An evolutionary path to altered cofactor specificity in a metalloenzyme.
Nat Commun 11 2738 2738 (2020)
PMID: 32483131 DOI: 10.1038/s41467-020-16478-0

Abstact

Almost half of all enzymes utilize a metal cofactor. However, the features that dictate the metal utilized by metalloenzymes are poorly understood, limiting our ability to manipulate these enzymes for industrial and health-associated applications. The ubiquitous iron/manganese superoxide dismutase (SOD) family exemplifies this deficit, as the specific metal used by any family member cannot be predicted. Biochemical, structural and paramagnetic analysis of two evolutionarily related SODs with different metal specificity produced by the pathogenic bacterium Staphylococcus aureus identifies two positions that control metal specificity. These residues make no direct contacts with the metal-coordinating ligands but control the metal's redox properties, demonstrating that subtle architectural changes can dramatically alter metal utilization. Introducing these mutations into S. aureus alters the ability of the bacterium to resist superoxide stress when metal starved by the host, revealing that small changes in metal-dependent activity can drive the evolution of metalloenzymes with new cofactor specificity.

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Primary Citation of related structures