6QQ9 image
Deposition Date 2019-02-18
Release Date 2019-06-19
Last Version Date 2024-11-13
Entry Detail
PDB ID:
6QQ9
Title:
Cryogenic temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 5.8 MGy
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.82 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Green fluorescent protein
Gene (Uniprot):GFP
Chain IDs:A
Chain Length:239
Number of Molecules:1
Biological Source:Aequorea victoria
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CRF A SER chromophore
Ligand Molecules
Primary Citation
Specific radiation damage is a lesser concern at room temperature.
Iucrj 6 665 680 (2019)
PMID: 31316810 DOI: 10.1107/S205225251900616X

Abstact

Carrying out macromolecular crystallography (MX) experiments at cryogenic temperatures significantly slows the rate of global radiation damage, thus facilitating the solution of high-resolution crystal structures of macromolecules. However, cryo-MX experiments suffer from the early onset of so-called specific radiation damage that affects certain amino-acid residues and, in particular, the active sites of many proteins. Here, a series of MX experiments are described which suggest that specific and global radiation damage are much less decoupled at room temperature than they are at cryogenic temperatures. The results reported here demonstrate the interest in reviving the practice of collecting MX diffraction data at room temperature and allow structural biologists to favourably envisage the development of time-resolved MX experiments at synchrotron sources.

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Primary Citation of related structures