6QQ4 image
Deposition Date 2019-02-17
Release Date 2020-03-18
Last Version Date 2024-10-09
Entry Detail
PDB ID:
6QQ4
Title:
Odorant-binding protein dmelOBP28a from Drosophila melanogaster
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:General odorant-binding protein 28a
Gene (Uniprot):Obp28a
Chain IDs:A, B
Chain Length:121
Number of Molecules:2
Biological Source:Drosophila melanogaster
Primary Citation
The Drosophila odorant-binding protein 28a is involved in the detection of the floral odour ss-ionone.
Cell.Mol.Life Sci. 77 2565 2577 (2020)
PMID: 31564000 DOI: 10.1007/s00018-019-03300-4

Abstact

Odorant-binding proteins (OBPs) are small soluble proteins that are thought to transport hydrophobic odorants across the aqueous sensillar lymph to olfactory receptors. A recent study revealed that OBP28a, one of the most abundant Drosophila OBPs, is not required for odorant transport, but acts in buffering rapid odour variation in the odorant environment. To further unravel and decipher its functional role, we expressed recombinant OBP28a and characterized its binding specificity. Using a fluorescent binding assay, we found that OBP28a binds a restricted number of floral-like chemicals, including ß-ionone, with an affinity in the micromolar range. We solved the X-ray crystal structure of OBP28a, which showed extensive conformation changes upon ligand binding. Mutant flies genetically deleted for the OBP28a gene showed altered responses to ß-ionone at a given concentration range, supporting its essential role in the detection of specific compounds present in the natural environment of the fly.

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Primary Citation of related structures
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