6QPW image
Deposition Date 2019-02-15
Release Date 2020-02-05
Last Version Date 2025-10-01
Entry Detail
PDB ID:
6QPW
Keywords:
Title:
Structural basis of cohesin ring opening
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Structural maintenance of chromosomes protein,Structural maintenance of chromosomes protein
Gene (Uniprot):CTHT_0066330
Chain IDs:A
Chain Length:242
Number of Molecules:1
Biological Source:Chaetomium thermophilum var. thermophilum DSM 1495
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sister chromatid cohesion protein 1
Gene (Uniprot):MCD1
Chain IDs:B
Chain Length:85
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Structural maintenance of chromosomes protein 3,Structural maintenance of chromosomes protein 3
Gene (Uniprot):SMC3
Chain IDs:C
Chain Length:535
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sister chromatid cohesion protein 1,Structural maintenance of chromosomes protein
Gene (Uniprot):CTHT_0066330, MCD1
Chain IDs:D (auth: E)
Chain Length:372
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C, Chaetomium thermophilum var. thermophilum DSM 1495
Primary Citation
The structure of the cohesin ATPase elucidates the mechanism of SMC-kleisin ring opening.
Nat.Struct.Mol.Biol. 27 233 239 (2020)
PMID: 32066964 DOI: 10.1038/s41594-020-0379-7

Abstact

Genome regulation requires control of chromosome organization by SMC-kleisin complexes. The cohesin complex contains the Smc1 and Smc3 subunits that associate with the kleisin Scc1 to form a ring-shaped complex that can topologically engage chromatin to regulate chromatin structure. Release from chromatin involves opening of the ring at the Smc3-Scc1 interface in a reaction that is controlled by acetylation and engagement of the Smc ATPase head domains. To understand the underlying molecular mechanisms, we have determined the 3.2-Å resolution cryo-electron microscopy structure of the ATPγS-bound, heterotrimeric cohesin ATPase head module and the 2.1-Å resolution crystal structure of a nucleotide-free Smc1-Scc1 subcomplex from Saccharomyces cerevisiae and Chaetomium thermophilium. We found that ATP-binding and Smc1-Smc3 heterodimerization promote conformational changes within the ATPase that are transmitted to the Smc coiled-coil domains. Remodeling of the coiled-coil domain of Smc3 abrogates the binding surface for Scc1, thus leading to ring opening at the Smc3-Scc1 interface.

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