6QPH image
Deposition Date 2019-02-14
Release Date 2020-02-12
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6QPH
Keywords:
Title:
Dunaliella minimal PSI complex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
R-Value Free:
0.35
R-Value Work:
0.33
R-Value Observed:
0.33
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Gene (Uniprot):Lhca2
Chain IDs:A (auth: 1)
Chain Length:195
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lhc2
Chain IDs:B (auth: 2)
Chain Length:211
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Gene (Uniprot):Lhca3
Chain IDs:C (auth: 3)
Chain Length:210
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lhc4
Chain IDs:D (auth: 4)
Chain Length:211
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A1
Gene (Uniprot):psaA
Chain IDs:E (auth: A)
Chain Length:739
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A2
Gene (Uniprot):psaB
Chain IDs:F (auth: B)
Chain Length:734
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I iron-sulfur center
Gene (Uniprot):psaC
Chain IDs:G (auth: C)
Chain Length:80
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsaD
Chain IDs:H (auth: D)
Chain Length:142
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsaE
Chain IDs:I (auth: E)
Chain Length:64
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsaF
Chain IDs:J (auth: F)
Chain Length:163
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit IX
Gene (Uniprot):psaJ
Chain IDs:K (auth: J)
Chain Length:41
Number of Molecules:1
Biological Source:Dunaliella salina
Primary Citation
Structure of a minimal photosystem I from the green alga Dunaliella salina.
Nat.Plants 6 321 327 (2020)
PMID: 32123351 DOI: 10.1038/s41477-020-0611-9

Abstact

Solar energy harnessed by oxygenic photosynthesis supports most of the life forms on Earth. In eukaryotes, photosynthesis occurs in chloroplasts and is achieved by membrane-embedded macromolecular complexes that contain core and peripheral antennae with multiple pigments. The structure of photosystem I (PSI) comprises the core and light-harvesting (LHCI) complexes, which together form PSI-LHCI. Here we determined the structure of PSI-LHCI from the salt-tolerant green alga Dunaliella salina using X-ray crystallography and electron cryo-microscopy. Our results reveal a previously undescribed configuration of the PSI core. It is composed of only 7 subunits, compared with 14-16 subunits in plants and the alga Chlamydomonas reinhardtii, and forms the smallest known PSI. The LHCI is poorly conserved at the sequence level and binds to pigments that form new energy pathways, and the interactions between the individual Lhca1-4 proteins are weakened. Overall, the data indicate the PSI of D. salina represents a different type of the molecular organization that provides important information for reconstructing the plasticity and evolution of PSI.

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