6QGM image
Deposition Date 2019-01-11
Release Date 2019-10-30
Last Version Date 2024-01-24
Entry Detail
PDB ID:
6QGM
Keywords:
Title:
VirX1 apo structure
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.75 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:VirX1
Gene (Uniprot):CPUG_00131
Chain IDs:A (auth: a), B (auth: b), C (auth: c), D (auth: d), E (auth: e), F (auth: f)
Chain Length:531
Number of Molecules:6
Biological Source:Cyanophage Syn10
Primary Citation
A marine viral halogenase that iodinates diverse substrates.
Nat.Chem. 11 1091 1097 (2019)
PMID: 31611633 DOI: 10.1038/s41557-019-0349-z

Abstact

Oceanic cyanobacteria are the most abundant oxygen-generating phototrophs on our planet and are therefore important to life. These organisms are infected by viruses called cyanophages, which have recently shown to encode metabolic genes that modulate host photosynthesis, phosphorus cycling and nucleotide metabolism. Herein we report the characterization of a wild-type flavin-dependent viral halogenase (VirX1) from a cyanophage. Notably, halogenases have been previously associated with secondary metabolism, tailoring natural products. Exploration of this viral halogenase reveals it capable of regioselective halogenation of a diverse range of substrates with a preference for forming aryl iodide species; this has potential implications for the metabolism of the infected host. Until recently, a flavin-dependent halogenase that is capable of iodination in vitro had not been reported. VirX1 is interesting from a biocatalytic perspective as it shows strikingly broad substrate flexibility and a clear preference for iodination, as illustrated by kinetic analysis. These factors together render it an attractive tool for synthesis.

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