6QD7 image
Deposition Date 2019-01-01
Release Date 2019-10-02
Last Version Date 2024-10-16
Entry Detail
PDB ID:
6QD7
Keywords:
Title:
EM structure of a EBOV-GP bound to 3T0331 neutralizing antibody
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Ebola virus (Taxon ID: 1570291)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein,Virion spike glycoprotein,EBOV-GP1
Gene (Uniprot):GP
Chain IDs:C (auth: A), E (auth: C), F (auth: E)
Chain Length:322
Number of Molecules:3
Biological Source:Ebola virus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein
Gene (Uniprot):GP
Chain IDs:D (auth: B), G (auth: D), H (auth: F)
Chain Length:168
Number of Molecules:3
Biological Source:Ebola virus
Polymer Type:polypeptide(L)
Molecule:Heavy chain
Chain IDs:B (auth: H), I (auth: X), J (auth: U)
Chain Length:224
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Light chain
Chain IDs:A (auth: L), K (auth: Z), L (auth: P)
Chain Length:214
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Polyclonal and convergent antibody response to Ebola virus vaccine rVSV-ZEBOV.
Nat. Med. 25 1589 1600 (2019)
PMID: 31591605 DOI: 10.1038/s41591-019-0602-4

Abstact

Recombinant vesicular stomatitis virus-Zaire Ebola virus (rVSV-ZEBOV) is the most advanced Ebola virus vaccine candidate and is currently being used to combat the outbreak of Ebola virus disease (EVD) in the Democratic Republic of the Congo (DRC). Here we examine the humoral immune response in a subset of human volunteers enrolled in a phase 1 rVSV-ZEBOV vaccination trial by performing comprehensive single B cell and electron microscopy structure analyses. Four studied vaccinees show polyclonal, yet reproducible and convergent B cell responses with shared sequence characteristics. EBOV-targeting antibodies cross-react with other Ebolavirus species, and detailed epitope mapping revealed overlapping target epitopes with antibodies isolated from EVD survivors. Moreover, in all vaccinees, we detected highly potent EBOV-neutralizing antibodies with activities comparable or superior to the monoclonal antibodies currently used in clinical trials. These include antibodies combining the IGHV3-15/IGLV1-40 immunoglobulin gene segments that were identified in all investigated individuals. Our findings will help to evaluate and direct current and future vaccination strategies and offer opportunities for novel EVD therapies.

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Chemical

Disease

Primary Citation of related structures
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