6QCM image
Entry Detail
PDB ID:
6QCM
EMDB ID:
Title:
Cryo em structure of the Listeria stressosome
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2018-12-28
Release Date:
2019-08-21
Method Details:
Experimental Method:
Resolution:
4.21 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:RsbS protein
Chain IDs:KA (auth: A), LA (auth: B), MA (auth: C), NA (auth: D), OA (auth: I), PA (auth: J), QA (auth: N), RA (auth: O), SA (auth: R), TA (auth: S), UA (auth: a), VA (auth: b), WA (auth: c), XA (auth: d), YA (auth: e), ZA (auth: f), AB (auth: g), BB (auth: h), CB (auth: i), DB (auth: j)
Chain Length:118
Number of Molecules:20
Biological Source:Listeria monocytogenes EGD-e
Polymer Type:polypeptide(L)
Description:RsbR protein
Chain IDs:A (auth: AB), B (auth: BC), E (auth: DC), G (auth: EB), I (auth: FA), J (auth: FB), K (auth: FC), M (auth: GC), N (auth: HC), P (auth: IC), Q (auth: K), R (auth: KB), S (auth: L), T (auth: LB), U (auth: M), V (auth: OB), W (auth: P), X (auth: PB), Y (auth: Q), Z (auth: SB), AA (auth: T), BA (auth: TB), CA (auth: U), DA (auth: UB), EA (auth: V), FA (auth: VB), GA (auth: W), HA (auth: X), IA (auth: Y), JA (auth: Z)
Chain Length:128
Number of Molecules:30
Biological Source:Listeria monocytogenes EGD-e
Polymer Type:polypeptide(L)
Description:RsbR protein,RsbR protein
Chain IDs:EB (auth: AD)
Chain Length:123
Number of Molecules:1
Biological Source:Listeria monocytogenes EGD-e
Polymer Type:polypeptide(L)
Description:RsbR protein
Chain IDs:C (auth: CB), D (auth: DB), F (auth: E), H (auth: F), L (auth: GB), O (auth: IB)
Chain Length:129
Number of Molecules:6
Biological Source:Listeria monocytogenes EGD-e
Polymer Type:polypeptide(L)
Description:RsbR protein
Chain IDs:FB (auth: CD), GB (auth: FD), HB (auth: HD)
Chain Length:136
Number of Molecules:3
Biological Source:Listeria monocytogenes EGD-e
Ligand Molecules
Primary Citation
The cryo-electron microscopy supramolecular structure of the bacterial stressosome unveils its mechanism of activation.
Nat Commun 10 3005 3005 (2019)
PMID: 31285450 DOI: 10.1038/s41467-019-10782-0

Abstact

How the stressosome, the epicenter of the stress response in bacteria, transmits stress signals from the environment has remained elusive. The stressosome consists of multiple copies of three proteins RsbR, RsbS and RsbT, a kinase that is important for its activation. Using cryo-electron microscopy, we determined the atomic organization of the Listeria monocytogenes stressosome at 3.38 Å resolution. RsbR and RsbS are organized in a 60-protomers truncated icosahedron. A key phosphorylation site on RsbR (T209) is partially hidden by an RsbR flexible loop, whose "open" or "closed" position could modulate stressosome activity. Interaction between three glutamic acids in the N-terminal domain of RsbR and the membrane-bound mini-protein Prli42 is essential for Listeria survival to stress. Together, our data provide the atomic model of the stressosome core and highlight a loop important for stressosome activation, paving the way towards elucidating the mechanism of signal transduction by the stressosome in bacteria.

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Primary Citation of related structures