6Q45 image
Entry Detail
PDB ID:
6Q45
Keywords:
Title:
F1-ATPase from Fusobacterium nucleatum
Biological Source:
PDB Version:
Deposition Date:
2018-12-05
Release Date:
2019-07-10
Method Details:
Experimental Method:
Resolution:
3.60 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:ATP synthase subunit alpha
Chain IDs:A, B, C, I, J, K
Chain Length:500
Number of Molecules:6
Biological Source:Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Polymer Type:polypeptide(L)
Description:ATP synthase subunit beta
Chain IDs:D, E, F, L, M, N
Chain Length:462
Number of Molecules:6
Biological Source:Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Polymer Type:polypeptide(L)
Description:ATP synthase gamma chain
Chain IDs:G, O
Chain Length:282
Number of Molecules:2
Biological Source:Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Polymer Type:polypeptide(L)
Description:ATP synthase epsilon chain
Chain IDs:H, P
Chain Length:134
Number of Molecules:2
Biological Source:Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Primary Citation
Structure of F1-ATPase from the obligate anaerobe Fusobacterium nucleatum.
Open Biology 9 190066 190066 (2019)
PMID: 31238823 DOI: 10.1098/rsob.190066

Abstact

The crystal structure of the F1-catalytic domain of the adenosine triphosphate (ATP) synthase has been determined from the pathogenic anaerobic bacterium Fusobacterium nucleatum. The enzyme can hydrolyse ATP but is partially inhibited. The structure is similar to those of the F1-ATPases from Caldalkalibacillus thermarum, which is more strongly inhibited in ATP hydrolysis, and in Mycobacterium smegmatis, which has a very low ATP hydrolytic activity. The βE-subunits in all three enzymes are in the conventional 'open' state, and in the case of C. thermarum and M. smegmatis, they are occupied by an ADP and phosphate (or sulfate), but in F. nucleatum, the occupancy by ADP appears to be partial. It is likely that the hydrolytic activity of the F. nucleatum enzyme is regulated by the concentration of ADP, as in mitochondria.

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