6Q2N image
Entry Detail
PDB ID:
6Q2N
EMDB ID:
Title:
Cryo-EM structure of RET/GFRa1/GDNF extracellular complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-08-08
Release Date:
2019-10-02
Method Details:
Experimental Method:
Resolution:
4.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Glial cell line-derived neurotrophic factor
Chain IDs:A, D (auth: B)
Chain Length:134
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:GDNF family receptor alpha-1
Chain IDs:B (auth: C), E (auth: D)
Chain Length:412
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Proto-oncogene tyrosine-protein kinase receptor Ret
Chain IDs:C (auth: E), F
Chain Length:617
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Cryo-EM analyses reveal the common mechanism and diversification in the activation of RET by different ligands.
Elife 8 ? ? (2019)
PMID: 31535977 DOI: 10.7554/eLife.47650

Abstact

RET is a receptor tyrosine kinase (RTK) that plays essential roles in development and has been implicated in several human diseases. Different from most of RTKs, RET requires not only its cognate ligands but also co-receptors for activation, the mechanisms of which remain unclear due to lack of high-resolution structures of the ligand/co-receptor/receptor complexes. Here, we report cryo-EM structures of the extracellular region ternary complexes of GDF15/GFRAL/RET, GDNF/GFRα1/RET, NRTN/GFRα2/RET and ARTN/GFRα3/RET. These structures reveal that all the four ligand/co-receptor pairs, while using different atomic interactions, induce a specific dimerization mode of RET that is poised to bring the two kinase domains into close proximity for cross-phosphorylation. The NRTN/GFRα2/RET dimeric complex further pack into a tetrameric assembly, which is shown by our cell-based assays to regulate the endocytosis of RET. Our analyses therefore reveal both the common mechanism and diversification in the activation of RET by different ligands.

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Primary Citation of related structures