6Q0X image
Deposition Date 2019-08-02
Release Date 2020-04-01
Last Version Date 2024-03-20
Entry Detail
PDB ID:
6Q0X
Title:
The cryo-EM structure of the SNX-BAR Mvp1 tetramer
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
4.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Sorting nexin MVP1
Gene (Uniprot):MVP1
Chain IDs:A, B, C, D
Chain Length:531
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae W303
Ligand Molecules
Primary Citation
The cryo-EM structure of the SNX-BAR Mvp1 tetramer.
Nat Commun 11 1506 1506 (2020)
PMID: 32198400 DOI: 10.1038/s41467-020-15110-5

Abstact

Sorting nexins (SNX) are a family of PX domain-containing proteins with pivotal roles in trafficking and signaling. SNX-BARs, which also have a curvature-generating Bin/Amphiphysin/Rvs (BAR) domain, have membrane-remodeling functions, particularly at the endosome. The minimal PX-BAR module is a dimer mediated by BAR-BAR interactions. Many SNX-BAR proteins, however, additionally have low-complexity N-terminal regions of unknown function. Here, we present the cryo-EM structure of the full-length SNX-BAR Mvp1, which is an autoinhibited tetramer. The tetramer is a dimer of dimers, wherein the membrane-interacting BAR surfaces are sequestered and the PX lipid-binding sites are occluded. The N-terminal low-complexity region of Mvp1 is essential for tetramerization. Mvp1 lacking its N-terminus is dimeric and exhibits enhanced membrane association. Membrane binding and remodeling by Mvp1 therefore requires unmasking of the PX and BAR domain lipid-interacting surfaces. This work reveals a tetrameric configuration of a SNX-BAR protein that provides critical insight into SNX-BAR function and regulation.

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Primary Citation of related structures