6PU0 image
Deposition Date 2019-07-16
Release Date 2019-09-04
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6PU0
Title:
Pigeon Cryptochrome4 bound to flavin adenine dinucleotide
Biological Source:
Source Organism:
Columba livia (Taxon ID: 8932)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cryptochrome-1
Gene (Uniprot):A306_00007326
Chain IDs:A
Chain Length:502
Number of Molecules:1
Biological Source:Columba livia
Primary Citation
Chemical and structural analysis of a photoactive vertebrate cryptochrome from pigeon.
Proc.Natl.Acad.Sci.USA 116 19449 19457 (2019)
PMID: 31484780 DOI: 10.1073/pnas.1907875116

Abstact

Computational and biochemical studies implicate the blue-light sensor cryptochrome (CRY) as an endogenous light-dependent magnetosensor enabling migratory birds to navigate using the Earth's magnetic field. Validation of such a mechanism has been hampered by the absence of structures of vertebrate CRYs that have functional photochemistry. Here we present crystal structures of Columba livia (pigeon) CRY4 that reveal evolutionarily conserved modifications to a sequence of Trp residues (Trp-triad) required for CRY photoreduction. In ClCRY4, the Trp-triad chain is extended to include a fourth Trp (W369) and a Tyr (Y319) residue at the protein surface that imparts an unusually high quantum yield of photoreduction. These results are consistent with observations of night migratory behavior in animals at low light levels and could have implications for photochemical pathways allowing magnetosensing.

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Primary Citation of related structures