6PTV image
Deposition Date 2019-07-16
Release Date 2019-08-07
Last Version Date 2023-11-15
Entry Detail
PDB ID:
6PTV
Keywords:
TRANSFERASE/ANTIBIOTIC
Title:
Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin
Biological Source:
Source Organism:
Rickettsia rickettsii (strain Sheila Smith) (Taxon ID: 392021)
Streptomyces griseus (Taxon ID: 1911)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.85 Å
R-Value Free:
0.20
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1
6PTV validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta sliding clamp
Gene (Uniprot):A1G_03290
Chain IDs:A, B, D (auth: C), F (auth: D)
Chain Length:387
Number of Molecules:4
Biological Source:Rickettsia rickettsii (strain Sheila Smith)
UniProt ID:A0A0H3AWV3 Pfam ID:PF00712, PF02767, PF02768
Polymer Type:polypeptide(L)
Molecule:ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY
Chain IDs:C (auth: X), E (auth: Y)
Chain Length:11
Number of Molecules:2
Biological Source:Streptomyces griseus
Ligand Molecules
MPD
Peptide-like Molecules
PRD_002311
Primary Citation
Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin
To Be Published ? ? ? (?)
Primary Citation of related structures
6DLK