6POR image
Deposition Date 2019-07-05
Release Date 2019-12-04
Last Version Date 2024-10-23
Entry Detail
PDB ID:
6POR
Keywords:
Title:
Antimicrobial lasso peptide ubonodin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ubonodin
Chain IDs:A
Chain Length:28
Number of Molecules:1
Biological Source:Burkholderia ubonensis
Ligand Molecules
Primary Citation
Discovery of Ubonodin, an Antimicrobial Lasso Peptide Active against Members of the Burkholderia cepacia Complex.
Chembiochem 21 1335 1340 (2020)
PMID: 31765515 DOI: 10.1002/cbic.201900707

Abstact

We report the heterologous expression, structure, and antimicrobial activity of a lasso peptide, ubonodin, encoded in the genome of Burkholderia ubonensis. The topology of ubonodin is unprecedented amongst lasso peptides, with 18 of its 28 amino acids found in the mechanically bonded loop segment. Ubonodin inhibits RNA polymerase in vitro and has potent antimicrobial activity against several pathogenic members of the Burkholderia genus, most notably B. cepacia and B. multivorans, causative agents of lung infections in cystic fibrosis patients.

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Protein

Chemical

Disease

Primary Citation of related structures
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