6PKZ image
Deposition Date 2019-06-30
Release Date 2020-07-01
Last Version Date 2023-10-11
Entry Detail
PDB ID:
6PKZ
Keywords:
DNA BINDING PROTEIN/DNA
Title:
Structure of human DNA polymerase beta N279A complexed with 8OA in the template base paired with incoming non-hydrolyzable GTP
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.74 Å
R-Value Free:
0.24
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
6PKZ validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA polymerase beta
Gene (Uniprot):POLB
Mutagens:N279A
Chain IDs:A
Chain Length:335
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P06746 Pfam ID:PF14716, PF10391, PF14792, PF14791 EC:2.7.7.7
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*TP*CP*GP*G)-3')
Chain IDs:D
Chain Length:5
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3')
Chain IDs:C (auth: P)
Chain Length:10
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*CP*GP*AP*CP*(A38) P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')
Chain IDs:B (auth: T)
Chain Length:16
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
MG
NA
XG4
Primary Citation
Structure of human DNA polymerase beta N279A complexed with 8OA in the template base paired with incoming non-hydrolyzable GTP
To Be Published ? ? ? (?)
Primary Citation of related structures
6PKZ