6PEH image
Entry Detail
PDB ID:
6PEH
Keywords:
Title:
Crystal structure of rabbit monoclonal anti-HIV antibody 1C2
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-06-20
Release Date:
2019-11-20
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:1C2 Fab Heavy Chain
Chain IDs:A (auth: H), C (auth: A)
Chain Length:237
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:1C2 Fab Light Chain
Chain IDs:B (auth: L), D (auth: B)
Chain Length:215
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Vaccination with Glycan-Modified HIV NFL Envelope Trimer-Liposomes Elicits Broadly Neutralizing Antibodies to Multiple Sites of Vulnerability.
Immunity 51 915 929.e7 (2019)
PMID: 31732167 DOI: 10.1016/j.immuni.2019.10.008

Abstact

The elicitation of broadly neutralizing antibodies (bNAbs) against the HIV-1 envelope glycoprotein (Env) trimer remains a major vaccine challenge. Most cross-conserved protein determinants are occluded by self-N-glycan shielding, limiting B cell recognition of the underlying polypeptide surface. The exceptions to the contiguous glycan shield include the conserved receptor CD4 binding site (CD4bs) and glycoprotein (gp)41 elements proximal to the furin cleavage site. Accordingly, we performed heterologous trimer-liposome prime:boosting in rabbits to drive B cells specific for cross-conserved sites. To preferentially expose the CD4bs to B cells, we eliminated proximal N-glycans while maintaining the native-like state of the cleavage-independent NFL trimers, followed by gradual N-glycan restoration coupled with heterologous boosting. This approach successfully elicited CD4bs-directed, cross-neutralizing Abs, including one targeting a unique glycan-protein epitope and a bNAb (87% breadth) directed to the gp120:gp41 interface, both resolved by high-resolution cryoelectron microscopy. This study provides proof-of-principle immunogenicity toward eliciting bNAbs by vaccination.

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