6P7V image
Deposition Date 2019-06-06
Release Date 2019-09-11
Last Version Date 2024-03-20
Entry Detail
PDB ID:
6P7V
Title:
Structure of the K. lactis CBF3 core
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cep3
Gene (Uniprot):KLLA0_D09977g
Chain IDs:C (auth: B), D (auth: A)
Chain Length:634
Number of Molecules:2
Biological Source:Kluyveromyces lactis
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ctf13
Gene (Uniprot):KLLA0_F13816g
Chain IDs:A (auth: C)
Chain Length:389
Number of Molecules:1
Biological Source:Kluyveromyces lactis
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Skp1
Gene (Uniprot):SKP1
Chain IDs:B (auth: D)
Chain Length:182
Number of Molecules:1
Biological Source:Kluyveromyces lactis
Ligand Molecules
Primary Citation
Structure of the Centromere Binding Factor 3 Complex from Kluyveromyces lactis.
J.Mol.Biol. 431 4444 4454 (2019)
PMID: 31425683 DOI: 10.1016/j.jmb.2019.08.003

Abstact

Kinetochores are the multiprotein complexes that link chromosomal centromeres to mitotic-spindle microtubules. Budding yeast centromeres comprise three sequential "centromere-determining elements", CDEI, II, and III. CDEI (8 bp) and CDEIII (∼25 bp) are conserved between Kluyveromyces lactis and Saccharomyces cerevisiae, but CDEII in the former is twice as long (160 bp) as CDEII in the latter (80 bp). The CBF3 complex recognizes CDEIII and is required for assembly of a centromeric nucleosome, which in turn recruits other kinetochore components. To understand differences in centromeric nucleosome assembly between K. lactis and S. cerevisiae, we determined the structure of a K. lactis CBF3 complex by electron cryomicroscopy at ∼4 Å resolution and compared it with published structures of S. cerevisiae CBF3. We show differences in the pose of Ndc10 and discuss potential models of the K. lactis centromeric nucleosome that account for the extended CDEII length.

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Chemical

Disease

Primary Citation of related structures
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