6P3P image
Entry Detail
PDB ID:
6P3P
Title:
Crystal structure of Mcl-1 in complex with compound 65
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2019-05-24
Release Date:
2019-07-03
Method Details:
Experimental Method:
Resolution:
1.61 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Induced myeloid leukemia cell differentiation protein Mcl-1
Mutations:E171S
Chain IDs:A
Chain Length:157
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Discovery of novel biaryl sulfonamide based Mcl-1 inhibitors.
Bioorg.Med.Chem.Lett. 29 2375 2382 (2019)
PMID: 31235261 DOI: 10.1016/j.bmcl.2019.06.008

Abstact

Mcl-1 is an anti-apoptotic protein overexpressed in hematological malignancies and several human solid tumors. Small molecule inhibition of Mcl-1 would offer an effective therapy to Mcl-1 mediated resistance. Subsequently, it has been the target of extensive research in the pharmaceutical industry. The discovery of a novel class of Mcl-1 small molecule inhibitors is described beginning with a simple biaryl sulfonamide hit derived from a high through put screen. A medicinal chemistry effort aided by SBDD generated compounds capable of disrupting the Mcl-1/Bid protein-protein interaction in vitro. The crystal structure of the Mcl-1 bound ligand represents a unique binding mode to the BH3 binding pocket where binding affinity is achieved, in part, through a sulfonamide oxygen/Arg263 interaction. The work highlights the some of the key challenges in designing effective protein-protein inhibitors for the Bcl-2 class of proteins.

Legend

Protein

Chemical

Disease

Primary Citation of related structures