6P3E image
Deposition Date 2019-05-23
Release Date 2019-11-27
Last Version Date 2024-03-20
Entry Detail
PDB ID:
6P3E
Keywords:
Title:
Mobile loops and electrostatic interactions maintain the flexible lambda tail tube
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
5.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tail tube protein
Gene (Uniprot):V
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R
Chain Length:246
Number of Molecules:18
Biological Source:Escherichia phage lambda
Ligand Molecules
Primary Citation
Mobile Loops and Electrostatic Interactions Maintain the Flexible Tail Tube of Bacteriophage Lambda.
J.Mol.Biol. 432 384 395 (2020)
PMID: 31711962 DOI: 10.1016/j.jmb.2019.10.031

Abstact

The long flexible tail tube of bacteriophage lambda connects its capsid to the tail tip. On infection, a DNA ejection signal is passed from the tip, along the tube to the capsid that triggers passage of the DNA down the tube and into the host bacterium. The tail tube is built from repeating units of the major tail protein, gpV, which has two distinctive domains. Its N-terminal domain has the same fold as proteins that form the rigid inner tubes of contractile tail phages, such as T4, and its C-terminal domain adopt an Ig-like fold of unknown function. We determined structures of the lambda tail tube in free tails and in virions before and after DNA ejection using cryoelectron microscopy. Modeling of the density maps reveals how electrostatic interactions and a mobile loop participate in assembly and also impart flexibility to the tube while maintaining its integrity. We also demonstrate how a common protein fold produces rigid tubes in some phages but flexible tubes in others.

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Primary Citation of related structures