ISDA: 6OMG

Deposition Date 2019-04-18

Release Date 2020-04-22

Last Version Date 2024-10-09

Entry Detail

PDB ID:

6OMG

Keywords:

IMMUNE SYSTEM

Title:

Structure of mouse CD1D- Glc-DAG (sn-1 C18:0, sn-2 C18:1c9)-iNKT TCR Ternary complex

Biological Source:

Source Organism:

Mus musculus (Taxon ID: 10090)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.10 Å

R-Value Free:

0.22

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

C 2 2 21

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Antigen-presenting glycoprotein CD1d1
Chain IDs:C (auth: A)
Chain Length:285
Number of Molecules:1
Biological Source:Mus musculus

UniProt ID:P11609 Pfam ID:PF16497, PF07654

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2m
Chain IDs:D (auth: B)
Chain Length:99
Number of Molecules:1
Biological Source:Mus musculus

UniProt ID:P01887 Pfam ID:PF07654

Polymer Type:polypeptide(L)
Molecule:CHIMERIC T CELL ANTIGEN RECEPTOR ALPHA CHAIN VA14,VA24
Chain IDs:A (auth: C)
Chain Length:209
Number of Molecules:1
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:CHIMERIC T CELL ANTIGEN RECEPTOR BETA CHAIN VB8.2, VB11
Chain IDs:B (auth: D)
Chain Length:241
Number of Molecules:1
Biological Source:Mus musculus

Ligand Molecules