ISDA

Deposition Date 2019-04-15

Release Date 2020-10-28

Last Version Date 2023-10-11

Entry Detail

PDB ID:

6OL0

Keywords:

membrane protein, transport protein

Title:

Structure of VcINDY bound to Malate

Biological Source:

Source Organism:

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (Taxon ID: 243277)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.50 Å

R-Value Free:

0.30

R-Value Work:

0.25

R-Value Observed:

0.26

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Transporter, NadC family
Gene (Uniprot):VC_A0025
Chain IDs:A (auth: C), B (auth: D), C (auth: A), D (auth: B)
Chain Length:449
Number of Molecules:4
Biological Source:Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

UniProt ID:Q9KNE0 Pfam ID:PF03600

Ligand Molecules

LMR

Primary Citation

Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter

Klinz-Thompson, C.D, Redondo, M.L, Mulligan, C, Sauer, D.B, Marden, J.J, Song, J, Tajkhorshid, E, Hunt, J.F, Stokes, D.L, Mindell, J.A, Wang, D.N, Gonzalez, R.L.Show

Biorxiv ? ? ? (2022)

DOI: 10.1101/2022.05.01.490196

Primary Citation of related structures