6OKO image
Deposition Date 2019-04-14
Release Date 2019-07-17
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6OKO
Keywords:
Title:
Crystal structure of mRIPK3 complexed with N-(3-fluoro-4-{1H-pyrrolo[2,3-b]pyridin-4-yloxy}phenyl)-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Receptor-interacting serine/threonine-protein kinase 3
Gene (Uniprot):Ripk3
Chain IDs:A, B
Chain Length:325
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Identification of RIPK3 Type II Inhibitors Using High-Throughput Mechanistic Studies in Hit Triage.
Acs Med.Chem.Lett. 11 266 271 (2020)
PMID: 32184955 DOI: 10.1021/acsmedchemlett.9b00065

Abstact

Necroptosis has been implicated in a variety of disease states, and RIPK3 is one of the kinases identified to play a critical role in this signaling pathway. In an effort to identify RIPK3 kinase inhibitors with a novel profile, mechanistic studies were incorporated at the hit triage stage. Utilization of these assays enabled identification of a Type II DFG-out inhibitor for RIPK3, which was confirmed by protein crystallography. Structure-based drug design on the inhibitors targeting this previously unreported conformation enabled an enhancement in selectivity against key off-target kinases.

Legend

Protein

Chemical

Disease

Primary Citation of related structures