6OHY image
Deposition Date 2019-04-08
Release Date 2019-06-05
Last Version Date 2024-10-09
Entry Detail
PDB ID:
6OHY
Keywords:
Title:
Chimpanzee SIV Env trimeric ectodomain.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein gp160
Gene (Uniprot):env
Mutagens:Q171K, A501C
Chain IDs:A, C, E (auth: D)
Chain Length:457
Number of Molecules:3
Biological Source:Simian immunodeficiency virus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein gp160
Gene (Uniprot):env
Mutagens:I559P, D605C
Chain IDs:B, D (auth: E), F
Chain Length:151
Number of Molecules:3
Biological Source:Simian immunodeficiency virus
Ligand Molecules
Primary Citation
The Chimpanzee SIV Envelope Trimer: Structure and Deployment as an HIV Vaccine Template.
Cell Rep 27 2426 2441.e6 (2019)
PMID: 31116986 DOI: 10.1016/j.celrep.2019.04.082

Abstact

Epitope-targeted HIV vaccine design seeks to focus antibody responses to broadly neutralizing antibody (bnAb) sites by sequential immunization. A chimpanzee simian immunodeficiency virus (SIV) envelope (Env) shares a single bnAb site, the variable loop 2 (V2)-apex, with HIV, suggesting its possible utility in an HIV immunization strategy. Here, we generate a chimpanzee SIV Env trimer, MT145K, which displays selective binding to HIV V2-apex bnAbs and precursor versions, but no binding to other HIV specificities. We determine the structure of the MT145K trimer by cryo-EM and show that its architecture is remarkably similar to HIV Env. Immunization of an HIV V2-apex bnAb precursor Ab-expressing knockin mouse with the chimpanzee MT145K trimer induces HIV V2-specific neutralizing responses. Subsequent boosting with an HIV trimer cocktail induces responses that exhibit some virus cross-neutralization. Overall, the chimpanzee MT145K trimer behaves as expected from design both in vitro and in vivo and is an attractive potential component of a sequential immunization regimen to induce V2-apex bnAbs.

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Chemical

Disease

Primary Citation of related structures