6OBA image
Deposition Date 2019-03-20
Release Date 2020-03-25
Last Version Date 2024-11-20
Entry Detail
PDB ID:
6OBA
Title:
The beta2 adrenergic receptor bound to a negative allosteric modulator
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
R-Value Free:
0.27
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-2 adrenergic receptor,Lysozyme,Beta-2 adrenergic receptor
Gene (Uniprot):e, ADRB2
Mutations:N187E, C1054T, C1097A
Chain IDs:A
Chain Length:500
Number of Molecules:1
Biological Source:Homo sapiens, Enterobacteria phage T4
Primary Citation
An allosteric modulator binds to a conformational hub in the beta2adrenergic receptor.
Nat.Chem.Biol. 16 749 755 (2020)
PMID: 32483378 DOI: 10.1038/s41589-020-0549-2

Abstact

Most drugs acting on G-protein-coupled receptors target the orthosteric binding pocket where the native hormone or neurotransmitter binds. There is much interest in finding allosteric ligands for these targets because they modulate physiologic signaling and promise to be more selective than orthosteric ligands. Here we describe a newly developed allosteric modulator of the β2-adrenergic receptor (β2AR), AS408, that binds to the membrane-facing surface of transmembrane segments 3 and 5, as revealed by X-ray crystallography. AS408 disrupts a water-mediated polar network involving E1223.41 and the backbone carbonyls of V2065.45 and S2075.46. The AS408 binding site is adjacent to a previously identified molecular switch for β2AR activation formed by I3.40, P5.50 and F6.44. The structure reveals how AS408 stabilizes the inactive conformation of this switch, thereby acting as a negative allosteric modulator for agonists and positive allosteric modulator for inverse agonists.

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