6OA1 image
Entry Detail
PDB ID:
6OA1
Title:
Structure of human PARG complexed with JA2120
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2019-03-15
Release Date:
2019-12-25
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Poly(ADP-ribose) glycohydrolase
Mutations:K616A, Q617A, K618A, E688A, K689A, K690A
Chain IDs:A
Chain Length:533
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death.
Nat Commun 10 5654 5654 (2019)
PMID: 31827085 DOI: 10.1038/s41467-019-13508-4

Abstact

Poly(ADP-ribose)ylation (PARylation) by PAR polymerase 1 (PARP1) and PARylation removal by poly(ADP-ribose) glycohydrolase (PARG) critically regulate DNA damage responses; yet, conflicting reports obscure PARG biology and its impact on cancer cell resistance to PARP1 inhibitors. Here, we found that PARG expression is upregulated in many cancers. We employed chemical library screening to identify and optimize methylxanthine derivatives as selective bioavailable PARG inhibitors. Multiple crystal structures reveal how substituent positions on the methylxanthine core dictate binding modes and inducible-complementarity with a PARG-specific tyrosine clasp and arginine switch, supporting inhibitor specificity and a competitive inhibition mechanism. Cell-based assays show selective PARG inhibition and PARP1 hyperPARylation. Moreover, our PARG inhibitor sensitizes cells to radiation-induced DNA damage, suppresses replication fork progression and impedes cancer cell survival. In PARP inhibitor-resistant A172 glioblastoma cells, our PARG inhibitor shows comparable killing to Nedaplatin, providing further proof-of-concept that selectively inhibiting PARG can impair cancer cell survival.

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Primary Citation of related structures