6O4M image
Deposition Date 2019-02-28
Release Date 2019-05-22
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6O4M
Keywords:
Title:
Racemic melittin
Biological Source:
Source Organism:
Apis mellifera (Taxon ID: 7460)
Method Details:
Experimental Method:
Resolution:
1.27 Å
R-Value Free:
0.23
R-Value Work:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Melittin
Gene (Uniprot):MELT
Chain IDs:B (auth: A), C (auth: B)
Chain Length:27
Number of Molecules:2
Biological Source:Apis mellifera
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(D)
Molecule:D-Melittin
Gene (Uniprot):MELT
Chain IDs:A (auth: D), D (auth: C)
Chain Length:27
Number of Molecules:2
Biological Source:Apis mellifera
Ligand Molecules
Primary Citation
Retention of Native Quaternary Structure in Racemic Melittin Crystals.
J.Am.Chem.Soc. 141 7704 7708 (2019)
PMID: 31059253 DOI: 10.1021/jacs.9b02691

Abstact

Racemic crystallography has been used to elucidate the secondary and tertiary structures of peptides and small proteins that are recalcitrant to conventional crystallization. It is unclear, however, whether racemic crystallography can capture native quaternary structure, which could be disrupted by heterochiral associations. We are exploring the use of racemic crystallography to characterize the self-assembly behavior of membrane-associated peptides, very few of which have been crystallized. We report a racemic crystal structure of the membrane-active peptide melittin; the new structure allows comparison with a previously reported crystal structure of L-melittin. The tetrameric assembly observed in crystalline L-melittin has been proposed to represent the tetrameric state detected in solution for this peptide. This tetrameric assembly is precisely reproduced in the racemic crystal, which strengthens the conclusion that the tetramer is biologically relevant. More broadly, these findings suggest that racemic crystallography can provide insight on native quaternary structure.

Legend

Protein

Chemical

Disease

Primary Citation of related structures