6O3I image
Deposition Date 2019-02-26
Release Date 2019-07-17
Last Version Date 2024-11-06
Entry Detail
PDB ID:
6O3I
Title:
Crystal Structure of Human IDO1 bound to navoximod (NLG-919)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.69 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Indoleamine 2,3-dioxygenase 1
Gene (Uniprot):IDO1
Chain IDs:A, B
Chain Length:420
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Discovery of Clinical Candidate (1R,4r)-4-((R)-2-((S)-6-Fluoro-5H-imidazo[5,1-a]isoindol-5-yl)-1-hydroxyethyl)cyclohexan-1-ol (Navoximod), a Potent and Selective Inhibitor of Indoleamine 2,3-Dioxygenase 1.
J.Med.Chem. 62 6705 6733 (2019)
PMID: 31264862 DOI: 10.1021/acs.jmedchem.9b00662

Abstact

A novel class of 5-substituted 5H-imidazo[5,1-a]isoindoles are described as potent inhibitors of indoleamine 2,3-dioxygenase 1 (IDO1). A structure-based drug design approach was used to elaborate the 5H-imidazo[5,1-a]isoindole core and to improve potency and pharmacological properties. Suitably placed hydrophobic and polar functional groups in the lead molecule allowed improvement of IDO1 inhibitory activity while minimizing off-target liabilities. Structure-activity relationship studies focused on optimizing IDO1 inhibition potency and a pharmacokinetic profile amenable to oral dosing while controlling CYP450 and hERG inhibitory properties.

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Primary Citation of related structures