6NIE image
Deposition Date 2018-12-27
Release Date 2019-10-02
Last Version Date 2024-03-13
Entry Detail
PDB ID:
6NIE
Title:
BesD with Fe(II), chloride, and alpha-ketoglutarate
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BesD, lysine halogenase
Gene (Uniprot):besD
Chain IDs:A, B, C, D
Chain Length:255
Number of Molecules:4
Biological Source:Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
Primary Citation
A family of radical halogenases for the engineering of amino-acid-based products.
Nat.Chem.Biol. 15 1009 1016 (2019)
PMID: 31548692 DOI: 10.1038/s41589-019-0355-x

Abstact

The integration of synthetic and biological catalysis enables new approaches to the synthesis of small molecules by combining the high selectivity of enzymes with the reaction diversity offered by synthetic chemistry. While organohalogens are valued for their bioactivity and utility as synthetic building blocks, only a handful of enzymes that carry out the regioselective halogenation of unactivated [Formula: see text] bonds have previously been identified. In this context, we report the structural characterization of BesD, a recently discovered radical halogenase from the FeII/α-ketogluturate-dependent family that chlorinates the free amino acid lysine. We also identify and characterize additional halogenases that produce mono- and dichlorinated, as well as brominated and azidated, amino acids. The substrate selectivity of this new family of radical halogenases takes advantage of the central role of amino acids in metabolism and enables engineering of biosynthetic pathways to afford a wide variety of compound classes, including heterocycles, diamines, α-keto acids and peptides.

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