ISDA

Deposition Date 2018-12-13

Release Date 2019-01-23

Last Version Date 2024-11-06

Entry Detail

PDB ID:

6NDB

Keywords:

CELL ADHESION/TOXIN

Title:

RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND COBALT

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
Calloselasma rhodostoma (Taxon ID: 8717)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.20 Å

R-Value Free:

0.29

R-Value Work:

0.22

R-Value Observed:

0.23

Space Group:

P 41

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Snaclec rhodocetin subunit gamma
Chain IDs:A, D, G, J, M, P
Chain Length:135
Number of Molecules:6
Biological Source:Calloselasma rhodostoma

UniProt ID:D2YW39 Pfam ID:PF00059

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Snaclec rhodocetin subunit delta
Chain IDs:B, E, H, K, N, Q
Chain Length:124
Number of Molecules:6
Biological Source:Calloselasma rhodostoma

UniProt ID:D2YW40 Pfam ID:PF00059

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Integrin alpha-2
Gene (Uniprot):ITGA2
Chain IDs:C, F, I, L, O, R
Chain Length:217
Number of Molecules:6
Biological Source:Homo sapiens

UniProt ID:P17301 Pfam ID:PF00092

Ligand Molecules