6NB7 image
Deposition Date 2018-12-06
Release Date 2019-02-06
Last Version Date 2024-10-16
Entry Detail
PDB ID:
6NB7
Keywords:
Title:
SARS-CoV complex with human neutralizing S230 antibody Fab fragment (state 2)
Biological Source:
Source Organism:
SARS coronavirus (Taxon ID: 227859)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A, B, C
Chain Length:1263
Number of Molecules:3
Biological Source:SARS coronavirus
Polymer Type:polypeptide(L)
Molecule:S230 heavy chain
Chain IDs:D, F (auth: G), G (auth: H)
Chain Length:127
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:S230 light chain
Chain IDs:E, H (auth: I), I (auth: L)
Chain Length:112
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell 176 1026 1039.e15 (2019)
PMID: 30712865 DOI: 10.1016/j.cell.2018.12.028

Abstact

Recent outbreaks of severe acute respiratory syndrome and Middle East respiratory syndrome, along with the threat of a future coronavirus-mediated pandemic, underscore the importance of finding ways to combat these viruses. The trimeric spike transmembrane glycoprotein S mediates entry into host cells and is the major target of neutralizing antibodies. To understand the humoral immune response elicited upon natural infections with coronaviruses, we structurally characterized the SARS-CoV and MERS-CoV S glycoproteins in complex with neutralizing antibodies isolated from human survivors. Although the two antibodies studied blocked attachment to the host cell receptor, only the anti-SARS-CoV S antibody triggered fusogenic conformational changes via receptor functional mimicry. These results provide a structural framework for understanding coronavirus neutralization by human antibodies and shed light on activation of coronavirus membrane fusion, which takes place through a receptor-driven ratcheting mechanism.

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Primary Citation of related structures