6NAH image
Deposition Date 2018-12-05
Release Date 2019-11-13
Last Version Date 2023-11-15
Entry Detail
PDB ID:
6NAH
Keywords:
HYDROLASE/HYDROLASE INHIBITOR
Title:
Crystal structure of Neisseria meningitidis ClpP protease in complex with Acyldepsipeptide-14 (ADEP-14)
Biological Source:
Source Organism:
Neisseria meningitidis (Taxon ID: 487)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.70 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
6NAH validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP-dependent Clp protease proteolytic subunit
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA (auth: a), BA (auth: b)
Chain Length:217
Number of Molecules:28
Biological Source:Neisseria meningitidis
UniProt ID:Q9JZ38 Pfam ID:PF00574
Polymer Type:polypeptide(L)
Molecule:Acyldepsipeptide-14
Chain IDs:CA (auth: c), DA (auth: e), EA (auth: f), FA (auth: g), GA (auth: h), HA (auth: i), IA (auth: j), JA (auth: k), KA (auth: l), LA (auth: m), MA (auth: n), NA (auth: o), OA (auth: p), PA (auth: q), QA (auth: r), RA (auth: s), SA (auth: t), TA (auth: u), UA (auth: v), VA (auth: w), WA (auth: x), XA (auth: y), YA (auth: z), ZA (auth: 0), AB (auth: 1), BB (auth: 2), CB (auth: 3), DB (auth: 4)
Chain Length:6
Number of Molecules:28
Biological Source:synthetic construct
Ligand Molecules
OCA
Primary Citation
ClpP protease activation results from the reorganization of the electrostatic interaction networks at the entrance pores.
Commun Biol 2 410 410 (2019)
PMID: 31925204 DOI: 10.1038/s42003-019-0656-3
Primary Citation of related structures
6NAH
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